package Subs::Header;
##############################################################################
#
# DESCRIPTION: This subroutine class produces an HTML documentation
# DESCRIPTION: header file which will serve as a home page for a
# DESCRIPTION: processing run.
# DESCRIPTION: The page created by this generic class is largely blank,
# DESCRIPTION: so most missions need to have their own sub-class which
# DESCRIPTION: fills in more information.
# DESCRIPTION:
# DESCRIPTION: This class provides a number of methods which may be used
# DESCRIPTION: to format HTML, such that sub-classes
# DESCRIPTION: should not need to explicitly use any HTML tags.
# DESCRIPTION: Sub-classes could over-ride these methods to produce
# DESCRIPTION: a page in something other than HTML.
#
# HISTORY:
#
# VERSION: 1.0
#
##############################################################################
use Subs::Sub;
@ISA = ("Subs::Sub");
use strict;
#########################################
# constructor
#########################################
sub new {
my $proto=shift;
my $self=$proto->SUPER::new();
$self->{DESCRIPTION}="Creating HTML header page";
########################
# Header file name
########################
$self->{FILE}=$self->filename()->get("header");
########################################
# put some generic info in the job par
########################################
my $procscriptver=$self->procpar()->read("version");
my $procdate= Util::Date->new()->date();
$self->jobpar->set({procscriptver => $procscriptver,
procdate => $procdate });
return $self;
}
#####################
# METHODS:
#####################
############################################
# first inherit init stuff and then
# generate the header file top
############################################
sub init {
my $self = shift;
###########################
# inherit the usual stuff
###########################
$self->SUPER::init();
##################################
# get some info
##################################
my $seq=$self->jobpar()->read("sequence");
###################################
# write the top of the header page
###################################
open HEADER, ">$self->{FILE}";
print HEADER "<HTML>\n";
print HEADER "<HEAD>\n";
print HEADER "<TITLE>Sequence $seq Header Page</TITLE>\n";
print HEADER "</HEAD>\n";
print HEADER "<BODY>\n";
print HEADER "<CENTER><H1>Sequence $seq Header Page</H1></CENTER>\n";
print HEADER "This page gives a basic description of this sequence\n";
print HEADER "and references to more detailed information.\n";
print HEADER "<P>\n";
print HEADER "The following information is also available:\n";
print HEADER "<UL>\n";
print HEADER $self->link_text();
print HEADER "</UL>\n";
print HEADER "<HR>\n";
close HEADER;
} # end of init method
######################################################################
# empty body - specific missions should over-ride this
# to fill in the contents of the header page.
######################################################################
sub body {
}
###################################################################
# generate the links to other pages which are found at the top of the page.
# Sub-classes should override this method to add more links.
###################################################################
sub link_text {
my $self = shift;
my $url;
my $text="";
my $filename=$self->filename();
$url=$filename->get("fileinfo");
$text .= "<LI><A HREF=\"$url\">A list of all files</A>\n";
$url=$filename->get("logindex");
$text .= "<LI><A HREF=\"$url\">The processing log index</A>\n";
return $text;
} # end of link_text method
#######################################################################
# first put the closing HTML tags in the header page, then
# record the name of the header page in the job.par
# and finally do inherited cleanup stuff
#######################################################################
sub cleanup {
my $self = shift;
##############################
# finish the file
##############################
open HEADER, ">>$self->{FILE}";
print HEADER "</BODY>\n";
print HEADER "</HTML>\n";
close HEADER;
#############################################
# record the name of the file in the jobpar
#############################################
$self->jobpar->set({header=>$self->{FILE}});
#############################
# do any inherited stuff
#############################
$self->SUPER::cleanup();
} # end of cleanup method
#######################################################
# begin a document section with the given heading
#######################################################
sub begin_section {
my $self=shift;
my $heading=shift;
open HEADER, ">>$self->{FILE}";
print HEADER "<H2>$heading</H2>\n";
print HEADER "<UL>\n";
close HEADER;
}
###########################################################################
# end a document section. This doesn't actually do anything,
# but you should use it in case a subclass wanted to do something special
# here.
###########################################################################
sub end_section {
my $self=shift;
open HEADER, ">>$self->{FILE}";
print HEADER "</UL>\n";
close HEADER;
}
###################################################
# begin a bulleted list
###################################################
sub begin_list {
my $self=shift;
open HEADER, ">>$self->{FILE}";
print HEADER "<UL>\n";
close HEADER;
}
###################################################
# end a bulleted list
###################################################
sub end_list {
my $self=shift;
open HEADER, ">>$self->{FILE}";
print HEADER "</UL>\n";
close HEADER;
}
######################################################################
# add an element to a bulleted list.
# Each item is a set of name-value pairs which will appear
# on the same line. Usually there is only one name-value pair,
# but sometimes it is useful to put two things (e.g. R.A. and Dec.)
# on the same line
######################################################################
sub item { # (name, value, name, value...)
my $self=shift;
######################################
# open the HTML file
######################################
open HEADER, ">>$self->{FILE}";
print HEADER "<LI>";
##################################
# loop over all name: value pairs
##################################
my $name;
my $data;
while($name=shift) {
$data=shift || "";
print HEADER "<STRONG>$name</STRONG> $data\n";
}
########################
# close the HTML file
########################
close HEADER;
} # end of item method
##################################################################
# generate a standard section giving name and address information
# for a given PI
##################################################################
sub pi_info {
my $self = shift;
my $prefix = shift;
my $type = shift;
if(! defined $type) { $type =uc($prefix) }
my $jobpar = $self->jobpar();
open HEADER, ">>$self->{FILE}";
print HEADER "<H2>$type Principal Investigator</H2>\n";
my $param;
foreach $param ("piname" , "piaddr1", "piaddr2", "piaddr3", "piaddr4",
"piaddr5", "piemail" ) {
my $value = $jobpar->read($prefix.$param);
if($value) {print HEADER "$value<br>\n"}
}
print HEADER "<P>\n";
close HEADER;
} # end of pi_info method